Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfatase-like hydrolase/transferase | FE383_RS07690 | Not Available | Negative | 1569759 - 1571441 | 62805.5 |
| acid stress response transcriptional regulator ydeo | FE383_RS07695 | Not Available | Negative | 1571843 - 1572604 | 28726.8 |
| two-component system connector safa | FE383_RS07700 | Not Available | Negative | 1572679 - 1572876 | 7272.08 |
| acid resistance putative oxidoreductase ydep | FE383_RS07705 | Not Available | Negative | 1573124 - 1575403 | 83499.8 |
| fimbrial protein | FE383_RS07710 | Not Available | Negative | 1575737 - 1576651 | 32011.3 |
| fimbrial protein | FE383_RS07715 | Not Available | Negative | 1576710 - 1577213 | 18145.5 |
| fimbrial protein | FE383_RS07720 | Not Available | Negative | 1577226 - 1577756 | 18949.6 |
| hypothetical protein | FE383_RS07725 | Not Available | Negative | 1577770 - 1578996 | 44519.5 |
| hypothetical protein | FE383_RS07730 | Not Available | Negative | 1579251 - 1579459 | 7916.35 |
| type ii toxin-antitoxin system serine/threonine protein kinase toxin hipa | FE383_RS07735 | Not Available | Negative | 1579771 - 1581093 | 49278.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





