Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-sensing cyclic-di-gmp phosphodiesterase dosp | FE383_RS07640 | Not Available | Negative | 1552251 - 1554650 | 90265.6 |
| diguanylate cyclase dosc | FE383_RS07645 | Not Available | Negative | 1554675 - 1556057 | 53180.7 |
| family 10 glycosylhydrolase | FE383_RS07650 | Not Available | Negative | 1556421 - 1557740 | 49576.9 |
| acid resistance gamma-aminobutyrate antiporter gadc | FE383_RS07655 | Not Available | Negative | 1557871 - 1559406 | 55080.0 |
| glutamate decarboxylase | FE383_RS07660 | Not Available | Negative | 1559562 - 1560962 | 52671.0 |
| m16 family metallopeptidase | FE383_RS07665 | Not Available | Negative | 1561324 - 1564107 | 104176.0 |
| tonb-dependent receptor plug domain-containing protein | FE383_RS07670 | Not Available | Negative | 1564164 - 1566536 | 89287.5 |
| abc transporter atp-binding protein/permease | FE383_RS07675 | Not Available | Negative | 1566574 - 1568259 | 64988.5 |
| protein ynep | FE383_RS07680 | Not Available | Positive | 1568462 - 1568584 | 4710.99 |
| anaerobic sulfatase maturase | FE383_RS07685 | Not Available | Negative | 1568550 - 1569707 | 44520.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





