Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | FE383_RS07590 | Not Available | Negative | 1542889 - 1544586 | 63201.0 |
| stationary-phase-induced ribosome-associated protein | FE383_RS07595 | Not Available | Negative | 1544743 - 1544880 | 5096.13 |
| biofilm-dependent modulation protein | FE383_RS07600 | Not Available | Negative | 1544982 - 1545197 | 7987.26 |
| peroxiredoxin osmc | FE383_RS07605 | Not Available | Positive | 1545542 - 1545973 | 15089.0 |
| abc transporter atp-binding protein | FE383_RS07610 | Not Available | Negative | 1546029 - 1546955 | 34623.1 |
| abc transporter atp-binding protein | FE383_RS07615 | Not Available | Negative | 1546948 - 1547934 | 36102.1 |
| d,d-dipeptide abc transporter permease | FE383_RS07620 | Not Available | Negative | 1547931 - 1548827 | 31972.9 |
| abc transporter permease | FE383_RS07625 | Not Available | Negative | 1548824 - 1549846 | 37347.3 |
| abc transporter substrate-binding protein | FE383_RS07630 | Not Available | Negative | 1549848 - 1551398 | 57644.2 |
| d-alanyl-d-alanine dipeptidase | FE383_RS07635 | Not Available | Negative | 1551412 - 1551993 | 21214.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





