Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase z subunit alpha | FE383_RS07535 | Not Available | Negative | 1527767 - 1531507 | 140234.0 |
| nitrate/nitrite transporter naru | FE383_RS07540 | Not Available | Negative | 1531589 - 1532977 | 49893.1 |
| hypothetical protein | FE383_RS07550 | Not Available | Negative | 1533301 - 1534631 | 50075.6 |
| hypothetical protein | FE383_RS07555 | Not Available | Negative | 1534670 - 1534945 | 10324.1 |
| aromatic amino acid efflux dmt transporter yddg | FE383_RS07560 | Not Available | Negative | 1535205 - 1536086 | 31541.3 |
| formate dehydrogenase-n subunit alpha | FE383_RS07565 | Not Available | Positive | 1536318 - 1539365 | 112819.0 |
| formate dehydrogenase n subunit beta | FE383_RS07570 | Not Available | Positive | 1539378 - 1540262 | 32240.4 |
| formate dehydrogenase-n subunit gamma | FE383_RS07575 | Not Available | Positive | 1540255 - 1540908 | 25370.0 |
| higa family addiction module antitoxin | FE383_RS07580 | Not Available | Negative | 1541315 - 1541599 | 10401.7 |
| alcohol dehydrogenase adhp | FE383_RS07585 | Not Available | Negative | 1541745 - 1542755 | 35381.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





