Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | FE383_RS08000 | Not Available | Negative | 1628971 - 1629282 | 12091.3 |
| Holin protein | FE383_RS08005 | Not Available | Negative | 1629287 - 1629502 | 7741.44 |
| putative zinc-binding protein ynfu | FE383_RS22480 | Not Available | Positive | 1629722 - 1629892 | 6371.7 |
| Csp | FE383_RS08010 | Not Available | Negative | 1630256 - 1630471 | 7717.12 |
| cold shock-like protein cspf | FE383_RS08015 | Not Available | Positive | 1630772 - 1630984 | 7563.18 |
| hypothetical protein | FE383_RS08020 | Not Available | Positive | 1631039 - 1631128 | 3193.12 |
| Antitermination protein q | FE383_RS08025 | Not Available | Negative | 1631406 - 1632158 | 27927.8 |
| Hypothetical protein | FE383_RS08030 | Not Available | Negative | 1632172 - 1633221 | 39277.5 |
| Hypothetical protein | FE383_RS08035 | Not Available | Negative | 1633223 - 1633501 | 11140.2 |
| protein rem | FE383_RS08040 | Not Available | Negative | 1633568 - 1633819 | 9235.26 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





