Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | FE383_RS07430 | Not Available | Negative | 1507245 - 1507763 | 19248.8 |
| nadph-dependent curcumin/dihydrocurcumin reductase | FE383_RS07435 | Not Available | Positive | 1507944 - 1508981 | 37592.9 |
| colanic acid/biofilm transcriptional regulator mcbr | FE383_RS07440 | Not Available | Positive | 1509179 - 1509844 | 25153.0 |
| tonb-dependent receptor pqqu | FE383_RS07445 | Not Available | Negative | 1509880 - 1511982 | 77265.0 |
| ynce family protein | FE383_RS07450 | Not Available | Positive | 1512224 - 1513285 | 38615.1 |
| l-asparagine permease | FE383_RS07455 | Not Available | Negative | 1513398 - 1514897 | 54236.3 |
| glutathione s-transferase family protein | FE383_RS07460 | Not Available | Positive | 1515164 - 1515781 | 23322.1 |
| ynch family protein | FE383_RS07465 | Not Available | Positive | 1515857 - 1516069 | 8270.6 |
| hypothetical protein | FE383_RS07475 | Not Available | Positive | 1516819 - 1518855 | 76670.2 |
| protein ydcd | FE383_RS22740 | Not Available | Positive | 1518839 - 1519321 | 18907.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





