Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tellurite resistance methyltransferase tehb | FE383_RS07330 | Not Available | Positive | 1490479 - 1491072 | 22532.0 |
| duf3313 domain-containing protein | FE383_RS07335 | Not Available | Positive | 1491374 - 1492042 | 24428.3 |
| hypothetical protein | FE383_RS07340 | Not Available | Negative | 1492141 - 1492566 | 16449.9 |
| rna-guided endonuclease insq/tnpb family protein | FE383_RS07345 | Not Available | Positive | 1492574 - 1493782 | 45743.1 |
| bene family transporter ydco | FE383_RS07350 | Not Available | Negative | 1493822 - 1495036 | 42117.8 |
| dna-binding transcriptional regulator sutr | FE383_RS07355 | Not Available | Positive | 1495089 - 1495625 | 19732.4 |
| 23s rrna 5-hydroxycytidine c2501 synthase | FE383_RS07360 | Not Available | Positive | 1495698 - 1497659 | 72705.9 |
| yncj family protein | FE383_RS07365 | Not Available | Negative | 1497751 - 1497981 | 8709.32 |
| type ii toxin-antitoxin system mrna interferase toxin hica | FE383_RS07370 | Not Available | Positive | 1498203 - 1498379 | 6782.3 |
| type ii toxin-antitoxin system antitoxin hicb | FE383_RS07375 | Not Available | Positive | 1498425 - 1498841 | 15247.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





