Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | FE383_RS07235 | Not Available | Positive | 1467143 - 1468039 | 33055.9 |
| bifunctional alpha/beta hydrolase/class i sam-dependent methyltransferase | FE383_RS07240 | Not Available | Positive | 1468055 - 1469812 | 65459.4 |
| phosphatase pap2/dual specificity phosphatase family protein | FE383_RS07245 | Not Available | Positive | 1469802 - 1471118 | 50547.6 |
| fmn-dependent nadh-azoreductase | FE383_RS07250 | Not Available | Negative | 1471172 - 1471777 | 21658.9 |
| atp-dependent rna helicase hrpa | FE383_RS07255 | Not Available | Positive | 1471978 - 1475880 | 149036.0 |
| duf218 domain-containing protein ydcf | FE383_RS07260 | Not Available | Positive | 1476152 - 1476952 | 29707.4 |
| aldehyde dehydrogenase | FE383_RS07265 | Not Available | Positive | 1477149 - 1478588 | 52275.8 |
| hypothetical protein | FE383_RS07270 | Not Available | Negative | 1478630 - 1479630 | 35326.0 |
| cytochrome b561 | FE383_RS07275 | Not Available | Positive | 1479819 - 1480349 | 20287.7 |
| periplasmic protein | FE383_RS07280 | Not Available | Positive | 1480594 - 1480767 | 5860.19 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





