Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation operon negative regulatory protein paax | FE383_RS07175 | Not Available | Positive | 1452456 - 1453406 | 35296.7 |
| phenylacetic acid degradation protein paay | FE383_RS07180 | Not Available | Positive | 1453388 - 1453978 | 21325.9 |
| hypothetical protein | FE383_RS07185 | Not Available | Negative | 1454082 - 1454147 | 2657.28 |
| hypothetical protein | FE383_RS07190 | Not Available | Positive | 1454309 - 1456834 | 85984.7 |
| is3-like element is2 family transposase | FE383_RS07195 | Not Available | Negative | 1456838 - 1458066 | 46430.7 |
| is30-like element is30 family transposase | FE383_RS07205 | Not Available | Positive | 1458275 - 1459426 | 44283.5 |
| hypothetical protein | FE383_RS07215 | Not Available | Positive | 1459433 - 1462930 | 120437.0 |
| pyridoxine 4-dehydrogenase | FE383_RS07220 | Not Available | Positive | 1463138 - 1463998 | 30707.8 |
| duf2773 domain-containing bactofilin | FE383_RS07225 | Not Available | Positive | 1464061 - 1466367 | 86721.2 |
| cdp-alcohol phosphatidyltransferase family protein | FE383_RS07230 | Not Available | Positive | 1466538 - 1467143 | 22525.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





