Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hslj | FE383_RS07075 | Not Available | Negative | 1430238 - 1430660 | 15166.5 |
| d-lactate dehydrogenase | FE383_RS07080 | Not Available | Negative | 1430771 - 1431760 | 36536.9 |
| ydbh family protein | FE383_RS07085 | Not Available | Positive | 1431968 - 1434607 | 96840.2 |
| ynbe family lipoprotein | FE383_RS07090 | Not Available | Positive | 1434604 - 1434789 | 6840.53 |
| ydbl family protein | FE383_RS07095 | Not Available | Positive | 1434797 - 1435123 | 11878.5 |
| transcriptional regulator fear | FE383_RS07100 | Not Available | Negative | 1435295 - 1436200 | 34622.3 |
| phenylacetaldehyde dehydrogenase | FE383_RS07105 | Not Available | Positive | 1436436 - 1437935 | 53702.1 |
| primary-amine oxidase | FE383_RS07110 | Not Available | Negative | 1437993 - 1440266 | 84383.2 |
| phenylacetic acid degradation bifunctional protein paaz | FE383_RS07115 | Not Available | Negative | 1440514 - 1442559 | 73006.8 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | FE383_RS07120 | Not Available | Positive | 1442844 - 1443773 | 35501.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





