Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ynan | FE383_RS22465 | Not Available | Positive | 1396907 - 1396954 | 1992.58 |
| zinc transporter zntb | FE383_RS06880 | Not Available | Positive | 1396968 - 1397951 | 36614.3 |
| protein ynal | FE383_RS22730 | Not Available | Positive | 1398225 - 1398398 | 6427.87 |
| atp-dependent rna helicase dbpa | FE383_RS06885 | Not Available | Positive | 1398428 - 1399801 | 49190.7 |
| trna 2-thiocytidine(32) synthetase ttca | FE383_RS06890 | Not Available | Negative | 1399930 - 1400865 | 35563.0 |
| ynam/ynft family protein | FE383_RS07050 | Not Available | Negative | 1423210 - 1423323 | 4013.06 |
| universal stress protein uspf | FE383_RS07055 | Not Available | Negative | 1424102 - 1424536 | 16017.4 |
| porin ompn | FE383_RS07060 | Not Available | Negative | 1424677 - 1425810 | 41294.0 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | FE383_RS07065 | Not Available | Negative | 1426177 - 1429701 | 128832.0 |
| duf333 domain-containing protein | FE383_RS07070 | Not Available | Positive | 1429975 - 1430241 | 8696.44 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





