Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Qin prophage | FE383_RS07945 | Not Available | Negative | 1623802 - 1624764 | 32903.8 |
| Dna packaging protein | FE383_RS07950 | Not Available | Negative | 1624715 - 1625284 | 21405.3 |
| Hypothetical protein | FE383_RS07955 | Not Available | Positive | 1625673 - 1625906 | 9023.82 |
| Putative envelope protein | FE383_RS07960 | Not Available | Positive | 1625964 - 1626374 | 16497.8 |
| gnsa/gnsb family addiction module toxin | FE383_RS07965 | Not Available | Negative | 1626526 - 1626699 | 6548.04 |
| small protein ynfr | FE383_RS07975 | Not Available | Negative | 1627105 - 1627170 | 2307.9 |
| cold-shock protein | FE383_RS07980 | Not Available | Negative | 1627173 - 1627361 | 7141.65 |
| Csp | FE383_RS07985 | Not Available | Negative | 1627372 - 1627584 | 7684.14 |
| Phage-tail assembly-like protein | FE383_RS07990 | Not Available | Negative | 1627947 - 1628444 | 18310.8 |
| Endolysin | FE383_RS07995 | Not Available | Negative | 1628441 - 1628974 | 19663.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





