Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator tyrr | FE383_RS06775 | Not Available | Positive | 1375638 - 1377179 | 57659.5 |
| thiol peroxidase | FE383_RS06780 | Not Available | Negative | 1377223 - 1377729 | 17836.3 |
| l-ala-d/l-glu epimerase | FE383_RS06785 | Not Available | Positive | 1377848 - 1378813 | 34676.0 |
| murein tripeptide amidase mpaa | FE383_RS06790 | Not Available | Negative | 1378788 - 1379516 | 26559.4 |
| hypothetical protein | FE383_RS06795 | Not Available | Negative | 1379643 - 1379780 | 5123.38 |
| alpha/beta hydrolase | FE383_RS06805 | Not Available | Negative | 1379851 - 1380771 | 33660.3 |
| dna-binding transcriptional regulator pgrr | FE383_RS06810 | Not Available | Positive | 1380909 - 1381808 | 33483.8 |
| murein tripeptide abc transporter substrate-binding protein mppa | FE383_RS06815 | Not Available | Positive | 1382145 - 1383758 | 59903.3 |
| low conductance mechanosensitive channel ynai | FE383_RS06820 | Not Available | Negative | 1383809 - 1384840 | 38756.8 |
| is5-like element is5 family transposase | FE383_RS06825 | Not Available | Positive | 1385030 - 1386010 | 37853.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





