Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent alcohol dehydrogenase | FE383_RS06725 | Not Available | Positive | 1363881 - 1364933 | 38218.6 |
| sugar phosphate isomerase/epimerase family protein | FE383_RS06730 | Not Available | Positive | 1364952 - 1365740 | 29833.6 |
| gfo/idh/moca family protein | FE383_RS06735 | Not Available | Positive | 1365750 - 1366805 | 38654.3 |
| kojibiose phosphorylase | FE383_RS06740 | Not Available | Positive | 1366802 - 1369069 | 84872.1 |
| beta-phosphoglucomutase | FE383_RS06745 | Not Available | Positive | 1369066 - 1369725 | 23566.3 |
| hypothetical protein | FE383_RS06750 | Not Available | Positive | 1369739 - 1370820 | 40045.4 |
| monomeric porin ompg | FE383_RS06755 | Not Available | Positive | 1370865 - 1371770 | 34915.0 |
| laci family dna-binding transcriptional regulator | FE383_RS06760 | Not Available | Negative | 1371881 - 1372879 | 36136.2 |
| ycjx family protein | FE383_RS06765 | Not Available | Positive | 1373035 - 1374432 | 52612.5 |
| ycjf family protein | FE383_RS06770 | Not Available | Positive | 1374429 - 1375490 | 39394.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





