Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic di-gmp phosphodiesterase | FE383_RS06575 | Not Available | Negative | 1333675 - 1335660 | 74669.2 |
| hypothetical protein | FE383_RS06580 | Not Available | Positive | 1335714 - 1335818 | 4122.21 |
| exoribonuclease ii | FE383_RS06585 | Not Available | Negative | 1335896 - 1337830 | 72422.7 |
| carboxymuconolactone decarboxylase family protein | FE383_RS06590 | Not Available | Negative | 1337898 - 1339025 | 42222.1 |
| enoyl-acp reductase fabi | FE383_RS06595 | Not Available | Negative | 1339169 - 1339957 | 27865.5 |
| duf559 domain-containing protein | FE383_RS06600 | Not Available | Negative | 1340325 - 1340678 | 13989.6 |
| peptide abc transporter atp-binding protein sapf | FE383_RS06605 | Not Available | Negative | 1340746 - 1341552 | 30572.5 |
| peptide abc transporter atp-binding protein sapd | FE383_RS06610 | Not Available | Negative | 1341554 - 1342546 | 37662.9 |
| peptide abc transporter permease sapc | FE383_RS06615 | Not Available | Negative | 1342546 - 1343436 | 31550.0 |
| putrescine export abc transporter permease sapb | FE383_RS06620 | Not Available | Negative | 1343423 - 1344388 | 36040.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





