Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase ii | FE383_RS06530 | Not Available | Negative | 1327488 - 1328078 | 21837.3 |
| phosphatidylglycerophosphatase b | FE383_RS06535 | Not Available | Positive | 1328248 - 1329012 | 28994.8 |
| lipopolysaccharide assembly protein lapa | FE383_RS06540 | Not Available | Positive | 1329161 - 1329469 | 11352.1 |
| lipopolysaccharide assembly protein lapb | FE383_RS06545 | Not Available | Positive | 1329476 - 1330645 | 44533.6 |
| orotidine-5'-phosphate decarboxylase | FE383_RS06550 | Not Available | Positive | 1330839 - 1331576 | 26351.8 |
| stress response translation initiation inhibitor ycih | FE383_RS06555 | Not Available | Positive | 1331576 - 1331902 | 11396.9 |
| osmotically-inducible lipoprotein osmb | FE383_RS06560 | Not Available | Negative | 1332028 - 1332246 | 6948.51 |
| dna-binding transcriptional regulator ycit | FE383_RS06565 | Not Available | Negative | 1332515 - 1333264 | 27604.2 |
| protein yciz | FE383_RS06570 | Not Available | Negative | 1333354 - 1333527 | 6441.71 |
| protein ymid | FE383_RS22460 | Not Available | Positive | 1333565 - 1333693 | 4937.05 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





