Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit alpha | FE383_RS06430 | Not Available | Negative | 1305334 - 1306140 | 28725.8 |
| tryptophan synthase subunit beta | FE383_RS06435 | Not Available | Negative | 1306140 - 1307333 | 42985.6 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | FE383_RS06440 | Not Available | Negative | 1307345 - 1308706 | 49495.1 |
| bifunctional anthranilate synthase glutamate amidotransferase component trpg/anthranilate phosphoribosyltransferase trpd | FE383_RS06445 | Not Available | Negative | 1308707 - 1310302 | 56873.4 |
| anthranilate synthase component i | FE383_RS06450 | Not Available | Negative | 1310302 - 1311864 | 57497.7 |
| trp operon leader peptide | FE383_RS06455 | Not Available | Negative | 1311956 - 1312000 | 1723.19 |
| rnase rnm | FE383_RS06460 | Not Available | Positive | 1312138 - 1313019 | 32595.8 |
| l-threonylcarbamoyladenylate synthase | FE383_RS06465 | Not Available | Positive | 1313016 - 1313636 | 23213.2 |
| duf2207 domain-containing protein | FE383_RS06470 | Not Available | Positive | 1313664 - 1315559 | 71293.1 |
| 23s rrna pseudouridine(2605) synthase rlub | FE383_RS06475 | Not Available | Positive | 1315770 - 1316645 | 32713.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





