Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii family protein | FE383_RS06380 | Not Available | Negative | 1299487 - 1299783 | 10602.6 |
| tonb system transport protein tonb | FE383_RS06385 | Not Available | Positive | 1300007 - 1300726 | 26095.7 |
| acyl-coa thioester hydrolase ycia | FE383_RS06390 | Not Available | Negative | 1300766 - 1301164 | 14231.4 |
| septation protein a | FE383_RS06395 | Not Available | Negative | 1301269 - 1301808 | 20791.3 |
| ycic family protein | FE383_RS06400 | Not Available | Negative | 1301838 - 1302581 | 26420.6 |
| hypothetical protein | FE383_RS06405 | Not Available | Negative | 1302609 - 1302698 | 3293.04 |
| outer membrane protein ompw | FE383_RS06410 | Not Available | Positive | 1302938 - 1303576 | 22929.1 |
| ferritin-like domain-containing protein | FE383_RS06415 | Not Available | Negative | 1303636 - 1304142 | 18962.5 |
| ferritin-like domain-containing protein | FE383_RS06420 | Not Available | Negative | 1304188 - 1304688 | 18598.2 |
| general stress protein | FE383_RS06425 | Not Available | Negative | 1304774 - 1304953 | 6002.69 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





