Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5-like element is5 family transposase | FE383_RS06330 | Not Available | Positive | 1288592 - 1289572 | 37853.6 |
| oligopeptide abc transporter substrate-binding protein oppa | FE383_RS06335 | Not Available | Positive | 1290100 - 1291731 | 60979.1 |
| oligopeptide abc transporter permease oppb | FE383_RS06340 | Not Available | Positive | 1291817 - 1292737 | 33445.3 |
| oligopeptide abc transporter permease oppc | FE383_RS06345 | Not Available | Positive | 1292752 - 1293660 | 33023.9 |
| murein tripeptide/oligopeptide abc transporter atp-binding protein oppd | FE383_RS06350 | Not Available | Positive | 1293672 - 1294685 | 37132.6 |
| murein tripeptide/oligopeptide abc transporter atp-binding protein oppf | FE383_RS06355 | Not Available | Positive | 1294682 - 1295686 | 37183.8 |
| hi1450 family dsdna-mimic protein | FE383_RS06360 | Not Available | Negative | 1295739 - 1296068 | 12687.7 |
| cardiolipin synthase | FE383_RS06365 | Not Available | Negative | 1296103 - 1297563 | 54825.6 |
| yciy family protein | FE383_RS06370 | Not Available | Positive | 1297706 - 1297879 | 7102.81 |
| voltage-gated potassium channel protein | FE383_RS06375 | Not Available | Negative | 1297934 - 1299187 | 46065.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





