Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 1607772 - 1607783 | Not Available |
| Hypothetical protein | FE383_RS07900 | Not Available | Positive | 1616434 - 1617180 | 27250.5 |
| dna-binding transcriptional regulator rspr | FE383_RS07905 | Not Available | Positive | 1617269 - 1617955 | 26566.7 |
| Putative selenium-binding protein ydfz | FE383_RS07910 | Not Available | Positive | 1618132 - 1618335 | 7276.83 |
| mannitol dehydrogenase family protein | FE383_RS07915 | Not Available | Negative | 1618370 - 1619830 | 53688.3 |
| Gp59 | FE383_RS07920 | Not Available | Negative | 1619919 - 1621202 | 46269.9 |
| ynam/ynft family protein | FE383_RS07925 | Not Available | Positive | 1621807 - 1621920 | 4013.06 |
| Hypothetical protein | FE383_RS07930 | Not Available | Positive | 1621989 - 1622222 | 8778.78 |
| Recombinase family protein | FE383_RS07935 | Not Available | Positive | 1622539 - 1623129 | 21853.7 |
| Qin prophage | FE383_RS07940 | Not Available | Negative | 1623227 - 1623802 | 21338.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





