Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ldr family protein | FE383_RS06180 | Not Available | Negative | 1259413 - 1259520 | 4014.03 |
| sodium-potassium/proton antiporter chaa | FE383_RS06190 | Not Available | Negative | 1259924 - 1261024 | 39170.9 |
| putative cation transport regulator chab | FE383_RS06195 | Not Available | Positive | 1261294 - 1261524 | 8945.18 |
| glutathione-specific gamma-glutamylcyclotransferase | FE383_RS06200 | Not Available | Positive | 1261682 - 1262377 | 25513.7 |
| dsre/f sulfur relay family protein ychn | FE383_RS06205 | Not Available | Negative | 1262421 - 1262774 | 12693.5 |
| inverse autotransporter invasin ycho | FE383_RS06210 | Not Available | Positive | 1262959 - 1264353 | 52102.6 |
| two-component system response regulator narl | FE383_RS06215 | Not Available | Negative | 1264354 - 1265004 | 23928.3 |
| nitrate/nitrite two-component system sensor histidine kinase narx | FE383_RS06220 | Not Available | Negative | 1264997 - 1266793 | 67088.0 |
| nitrate transporter nark | FE383_RS06225 | Not Available | Positive | 1267132 - 1268523 | 49696.3 |
| nitrate reductase subunit alpha | FE383_RS06230 | Not Available | Positive | 1269039 - 1272782 | 140497.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





