Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | FE383_RS06120 | Not Available | Negative | 1251201 - 1252052 | 30927.1 |
| lipoprotein insertase outer membrane protein lolb | FE383_RS06125 | Not Available | Negative | 1252052 - 1252675 | 23552.1 |
| glutamyl-trna reductase | FE383_RS06130 | Not Available | Positive | 1252889 - 1254145 | 46309.5 |
| peptide chain release factor 1 | FE383_RS06135 | Not Available | Positive | 1254187 - 1255269 | 40519.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | FE383_RS06140 | Not Available | Positive | 1255269 - 1256102 | 30976.8 |
| invasion regulator sirb2 | FE383_RS06145 | Not Available | Positive | 1256099 - 1256491 | 14639.7 |
| invasion regulator sirb1 | FE383_RS06150 | Not Available | Positive | 1256495 - 1257304 | 30843.1 |
| 3-deoxy-8-phosphooctulonate synthase | FE383_RS06155 | Not Available | Positive | 1257340 - 1258194 | 30834.5 |
| type i toxin-antitoxin system toxin ldr family protein | FE383_RS06160 | Not Available | Negative | 1258343 - 1258450 | 4014.03 |
| type i toxin-antitoxin system toxin ldr family protein | FE383_RS06170 | Not Available | Negative | 1258878 - 1258985 | 3971.95 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





