Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase phosphoryl donor subunit dham | FE383_RS06070 | Not Available | Negative | 1236871 - 1238289 | 51451.5 |
| dihydroxyacetone kinase subunit dhal | FE383_RS06075 | Not Available | Negative | 1238300 - 1238932 | 22633.1 |
| dihydroxyacetone kinase subunit dhak | FE383_RS06080 | Not Available | Negative | 1238943 - 1240013 | 38217.4 |
| dihydroxyacetone kinase operon transcriptional regulator dhar | FE383_RS06085 | Not Available | Positive | 1240241 - 1242160 | 70596.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | FE383_RS06090 | Not Available | Negative | 1242260 - 1245127 | 99690.6 |
| redox-regulated atpase ychf | FE383_RS06095 | Not Available | Negative | 1245896 - 1246987 | 39669.6 |
| aminoacyl-trna hydrolase | FE383_RS06100 | Not Available | Negative | 1247104 - 1247688 | 21083.5 |
| stress-induced protein ychh | FE383_RS06105 | Not Available | Positive | 1247966 - 1248244 | 10486.9 |
| c4-dicarboxylic acid transporter daua | FE383_RS06110 | Not Available | Negative | 1248299 - 1249978 | 59416.8 |
| ribose-phosphate diphosphokinase | FE383_RS06115 | Not Available | Negative | 1250103 - 1251050 | 34220.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





