Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ymgd family protein | FE383_RS05920 | Not Available | Negative | 1211480 - 1211815 | 12114.9 |
| ymgg-like glycine zipper-containing protein | FE383_RS05925 | Not Available | Negative | 1211819 - 1212163 | 10807.6 |
| protein ymgi | FE383_RS05930 | Not Available | Negative | 1212165 - 1212338 | 6518.21 |
| protein ymgj | FE383_RS05935 | Not Available | Positive | 1212439 - 1212624 | 7362.32 |
| hypothetical protein | FE383_RS05940 | Not Available | Positive | 1212585 - 1212704 | 4155.98 |
| hypothetical protein | FE383_RS05945 | Not Available | Positive | 1212739 - 1213082 | 12490.3 |
| cell division topological specificity factor mine | FE383_RS05950 | Not Available | Negative | 1213454 - 1213720 | 10235.5 |
| septum site-determining protein mind | FE383_RS05955 | Not Available | Negative | 1213724 - 1214536 | 29615.8 |
| septum site-determining protein minc | FE383_RS05960 | Not Available | Negative | 1214560 - 1215255 | 24776.9 |
| ycgj family protein | FE383_RS05965 | Not Available | Positive | 1215775 - 1216143 | 13415.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





