Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell death peptidase lit | FE383_RS05745 | Not Available | Positive | 1187870 - 1188763 | 33764.1 |
| dna-binding transcriptional repressor blur | FE383_RS05870 | Not Available | Negative | 1202503 - 1203234 | 28266.2 |
| blue light-responsive regulator bluf | FE383_RS05875 | Not Available | Negative | 1203439 - 1204650 | 45297.6 |
| regulatory protein ycgz | FE383_RS05880 | Not Available | Positive | 1204964 - 1205200 | 8769.5 |
| two-component-system connector protein ymga | FE383_RS05885 | Not Available | Positive | 1205243 - 1205515 | 10345.5 |
| biofilm/acid-resistance regulator arir | FE383_RS05890 | Not Available | Positive | 1205544 - 1205810 | 9694.59 |
| protein ymgc | FE383_RS05895 | Not Available | Positive | 1205923 - 1206171 | 9701.79 |
| cyclic diguanylate phosphodiesterase | FE383_RS05900 | Not Available | Positive | 1206503 - 1208026 | 56909.2 |
| cell division-associated protein ymgf | FE383_RS05905 | Not Available | Positive | 1208158 - 1208376 | 8255.35 |
| hypothetical protein | FE383_RS22355 | Not Available | Positive | 1208776 - 1211423 | 94451.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





