Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase phoq | FE383_RS05695 | Not Available | Negative | 1177491 - 1178951 | 55302.8 |
| two-component system response regulator phop | FE383_RS05700 | Not Available | Negative | 1178951 - 1179622 | 25536.7 |
| adenylosuccinate lyase | FE383_RS05705 | Not Available | Negative | 1179791 - 1181161 | 51545.7 |
| high frequency lysogenization protein hfld | FE383_RS05710 | Not Available | Negative | 1181165 - 1181806 | 22949.0 |
| trna 2-thiouridine(34) synthase mnma | FE383_RS05715 | Not Available | Negative | 1181842 - 1182948 | 40961.7 |
| phosphatase nudj | FE383_RS05720 | Not Available | Negative | 1183002 - 1183463 | 17433.8 |
| 23s rrna pseudouridine(2457) synthase rlue | FE383_RS05725 | Not Available | Negative | 1183473 - 1184126 | 24881.8 |
| nadp-dependent isocitrate dehydrogenase | FE383_RS05730 | Not Available | Positive | 1184298 - 1185548 | 45759.3 |
| class i sam-dependent methyltransferase | FE383_RS05735 | Not Available | Negative | 1186042 - 1186707 | 25148.3 |
| protein ymfe | FE383_RS05740 | Not Available | Negative | 1186708 - 1187412 | 27580.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





