Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage protein | FE383_RS06960 | Not Available | Positive | 1409282 - 1409578 | 10976.1 |
| Cii protein | FE383_RS06965 | Not Available | Positive | 1409601 - 1410023 | 15743.9 |
| Prpo | FE383_RS06970 | Not Available | Positive | 1410036 - 1410893 | 32510.8 |
| Dna replication protein | FE383_RS06975 | Not Available | Positive | 1410900 - 1411646 | 28129.8 |
| Hypothetical protein | FE383_RS06980 | Not Available | Positive | 1411669 - 1412121 | 16416.5 |
| Rz1 protein | FE383_RS06985 | Not Available | Positive | 1412317 - 1412502 | 6761.6 |
| trk system potassium transporter trkg | FE383_RS06990 | Not Available | Positive | 1412699 - 1414156 | 53946.9 |
| Dna modification methylase | FE383_RS06995 | Not Available | Positive | 1414294 - 1414557 | 9787.9 |
| Hypothetical protein | FE383_RS07000 | Not Available | Positive | 1414538 - 1414897 | 13473.9 |
| Putative tail assembly chaperone | FE383_RS22835 | Not Available | Positive | 1415005 - 1415205 | 7612.19 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





