Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FE383_RS05140 | Not Available | Positive | 1068125 - 1068334 | 7779.91 |
| sodium/proline symporter putp | FE383_RS05145 | Not Available | Positive | 1068493 - 1070001 | 54347.3 |
| hypothetical protein | FE383_RS05150 | Not Available | Positive | 1070544 - 1071373 | 30537.7 |
| iron uptake system protein efeo | FE383_RS05155 | Not Available | Positive | 1071431 - 1072558 | 41139.8 |
| iron uptake transporter deferrochelatase/peroxidase subunit | FE383_RS05160 | Not Available | Positive | 1072564 - 1073835 | 46756.9 |
| phosphate starvation-inducible protein phoh | FE383_RS05165 | Not Available | Positive | 1074456 - 1075244 | 29268.4 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | FE383_RS05170 | Not Available | Negative | 1075294 - 1075707 | 16082.7 |
| poly-beta-1,6-n-acetyl-d-glucosamine synthase | FE383_RS05175 | Not Available | Negative | 1075709 - 1077034 | 50768.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | FE383_RS05180 | Not Available | Negative | 1077027 - 1079045 | 77416.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | FE383_RS05185 | Not Available | Negative | 1079054 - 1081477 | 92211.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





