Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1-like element is1d family transposase | FE383_RS04990 | Not Available | Positive | 1039021 - 1039718 | 26584.4 |
| cold shock-like protein csph | FE383_RS04995 | Not Available | Negative | 1040151 - 1040363 | 7720.48 |
| cold shock protein cspg | FE383_RS05000 | Not Available | Positive | 1040649 - 1040861 | 7781.14 |
| cold-shock protein | FE383_RS05005 | Not Available | Positive | 1040872 - 1041060 | 7104.55 |
| protein ymce | FE383_RS05010 | Not Available | Positive | 1041035 - 1041265 | 8727.65 |
| gnsa/gnsb family addiction module toxin | FE383_RS05015 | Not Available | Positive | 1041255 - 1041428 | 6575.99 |
| 4fe-4s binding protein | FE383_RS05020 | Not Available | Negative | 1041477 - 1042550 | 40099.3 |
| tmao reductase system sensor histidine kinase/response regulator tors | FE383_RS05025 | Not Available | Negative | 1042622 - 1045366 | 101030.0 |
| tmao reductase system periplasmic protein tort | FE383_RS05030 | Not Available | Positive | 1045449 - 1046477 | 37866.9 |
| two-component system response regulator torr | FE383_RS05035 | Not Available | Negative | 1046450 - 1047142 | 26234.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





