Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | FE383_RS04940 | Not Available | Positive | 1028484 - 1029620 | 42426.3 |
| cytochrome bd-ii oxidase subunit cbdx | FE383_RS04945 | Not Available | Positive | 1029633 - 1029725 | 3597.68 |
| bifunctional acid phosphatase/4-phytase | FE383_RS04950 | Not Available | Positive | 1029805 - 1031103 | 47059.5 |
| tyrosine-protein kinase | FE383_RS04955 | Not Available | Negative | 1031218 - 1033398 | 81246.5 |
| protein-tyrosine-phosphatase etp | FE383_RS04960 | Not Available | Negative | 1033418 - 1033864 | 16386.9 |
| polysaccharide export protein | FE383_RS04965 | Not Available | Negative | 1033852 - 1034991 | 41743.2 |
| yjbh domain-containing protein | FE383_RS04970 | Not Available | Negative | 1035037 - 1037133 | 78691.3 |
| capsule biosynthesis gfcc family protein | FE383_RS04975 | Not Available | Negative | 1037133 - 1037879 | 27297.6 |
| lipoprotein gfcb | FE383_RS04980 | Not Available | Negative | 1037876 - 1038520 | 24268.9 |
| threonine-rich inner membrane protein gfca | FE383_RS04985 | Not Available | Negative | 1038627 - 1038932 | 9508.04 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





