Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp-s regulon transcriptional coactivator sxy | FE383_RS04840 | Not Available | Positive | 1010326 - 1010955 | 24148.3 |
| yccs family putative transporter | FE383_RS04845 | Not Available | Negative | 1010918 - 1013080 | 82021.8 |
| yccf domain-containing protein | FE383_RS04850 | Not Available | Negative | 1013090 - 1013536 | 16276.3 |
| dna helicase iv | FE383_RS04855 | Not Available | Positive | 1013659 - 1015713 | 77980.5 |
| methylglyoxal synthase | FE383_RS04860 | Not Available | Negative | 1015745 - 1016203 | 16919.6 |
| duf2057 family protein | FE383_RS04865 | Not Available | Negative | 1016299 - 1016961 | 24595.5 |
| coa-binding protein | FE383_RS04870 | Not Available | Positive | 1017134 - 1017547 | 14702.0 |
| heat shock protein hspq | FE383_RS04875 | Not Available | Negative | 1017592 - 1017909 | 11779.9 |
| 23s rrna (cytosine(1962)-c(5))-methyltransferase rlmi | FE383_RS04880 | Not Available | Negative | 1017967 - 1019157 | 44359.5 |
| acylphosphatase | FE383_RS04885 | Not Available | Positive | 1019252 - 1019530 | 10300.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





