Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system endodeoxyribonuclease toxin ralr | FE383_RS06910 | Not Available | Negative | 1402650 - 1402844 | 7019.25 |
| Rect | FE383_RS06915 | Not Available | Negative | 1402901 - 1403710 | 29722.8 |
| Exodeoxyribonuclease viii | FE383_RS06920 | Not Available | Negative | 1403703 - 1406303 | 96373.2 |
| protein racc | FE383_RS06925 | Not Available | Negative | 1406405 - 1406680 | 10016.3 |
| Hypothetical protein | FE383_RS06930 | Not Available | Negative | 1406755 - 1406925 | 6584.08 |
| Kil protein | FE383_RS06935 | Not Available | Negative | 1406925 - 1407146 | 8434.29 |
| Superinfection exclusion protein b | FE383_RS06940 | Not Available | Positive | 1407588 - 1408076 | 19244.8 |
| Hypothetical protein | FE383_RS06945 | Not Available | Negative | 1408073 - 1408228 | 5768.84 |
| phage protein | FE383_RS22735 | Not Available | Negative | 1408239 - 1408373 | 5194.21 |
| dna-binding transcriptional repressor racr | FE383_RS06955 | Not Available | Negative | 1408682 - 1409158 | 17664.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





