Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | FE383_RS04540 | Not Available | Positive | 936418 - 937848 | 52499.5 |
| lysr family transcriptional regulator | FE383_RS04545 | Not Available | Negative | 937849 - 938757 | 34296.3 |
| nad(p)h oxidoreductase | FE383_RS04550 | Not Available | Positive | 938857 - 939447 | 23037.4 |
| pyruvate formate lyase 1-activating protein | FE383_RS04555 | Not Available | Negative | 939529 - 940269 | 28205.9 |
| formate c-acetyltransferase | FE383_RS04560 | Not Available | Negative | 940461 - 942743 | 85362.0 |
| formate transporter foca | FE383_RS04565 | Not Available | Negative | 942798 - 943655 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | FE383_RS04570 | Not Available | Negative | 944061 - 945821 | 65655.0 |
| duf421 domain-containing protein | FE383_RS04575 | Not Available | Positive | 945951 - 946643 | 26283.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | FE383_RS04580 | Not Available | Positive | 946842 - 947930 | 39785.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | FE383_RS04585 | Not Available | Positive | 948001 - 949284 | 46098.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





