Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine-responsive transcriptional regulator lrp | FE383_RS04490 | Not Available | Positive | 921784 - 922278 | 18887.9 |
| dna translocase ftsk | FE383_RS04495 | Not Available | Positive | 922413 - 926402 | 146671.0 |
| outer membrane lipoprotein chaperone lola | FE383_RS04500 | Not Available | Positive | 926561 - 927172 | 22498.2 |
| replication-associated recombination protein rara | FE383_RS04505 | Not Available | Positive | 927183 - 928526 | 49628.8 |
| serine--trna ligase | FE383_RS04510 | Not Available | Positive | 928617 - 929909 | 48416.8 |
| dimethylsulfoxide reductase subunit a | FE383_RS04515 | Not Available | Positive | 930148 - 932592 | 90403.7 |
| dimethylsulfoxide reductase iron-sulfur subunit dmsb | FE383_RS04520 | Not Available | Positive | 932603 - 933220 | 22870.1 |
| dimethyl sulfoxide reductase anchor subunit dmsc | FE383_RS04525 | Not Available | Positive | 933222 - 934085 | 30828.2 |
| isochorismate family cysteine hydrolase ycac | FE383_RS04530 | Not Available | Negative | 934120 - 934746 | 23101.5 |
| mfs transporter | FE383_RS04535 | Not Available | Positive | 935060 - 936208 | 41434.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





