Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock-like protein cspd | FE383_RS04440 | Not Available | Negative | 911555 - 911779 | 7969.41 |
| protein yljb | FE383_RS22450 | Not Available | Positive | 911929 - 912003 | 2707.06 |
| atp-dependent clp protease adapter clps | FE383_RS04445 | Not Available | Positive | 912102 - 912422 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | FE383_RS04450 | Not Available | Positive | 912453 - 914729 | 84211.9 |
| Trna-ser | Not Available | Not Available | Positive | 915073 - 915160 | Not Available |
| translation initiation factor if-1 | FE383_RS04465 | Not Available | Negative | 915414 - 915632 | 8250.1 |
| leucyl/phenylalanyl-trna--protein transferase | FE383_RS04470 | Not Available | Negative | 915917 - 916621 | 26620.0 |
| heme abc transporter atp-binding protein/permease cydc | FE383_RS04475 | Not Available | Negative | 916663 - 918384 | 62924.1 |
| heme abc transporter permease/atp-binding protein cydd | FE383_RS04480 | Not Available | Negative | 918385 - 920151 | 65060.0 |
| thioredoxin-disulfide reductase | FE383_RS04485 | Not Available | Negative | 920274 - 921239 | 34625.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





