Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low-specificity l-threonine aldolase | FE383_RS04390 | Not Available | Negative | 897482 - 898483 | 36496.8 |
| ubiquinone-dependent pyruvate dehydrogenase | FE383_RS04395 | Not Available | Negative | 898520 - 900238 | 62015.0 |
| nadh oxidoreductase | FE383_RS04400 | Not Available | Negative | 900371 - 901339 | 35741.8 |
| hydroxylamine reductase | FE383_RS04405 | Not Available | Negative | 901351 - 903003 | 60067.3 |
| l-lysine exporter lyso | FE383_RS04410 | Not Available | Negative | 903147 - 904046 | 32342.2 |
| aquaporin z | FE383_RS04415 | Not Available | Negative | 904541 - 905236 | 23704.2 |
| atp-dependent endonuclease | FE383_RS04420 | Not Available | Positive | 905662 - 907320 | 63593.0 |
| virk/ybjx family protein | FE383_RS04425 | Not Available | Negative | 907317 - 908273 | 37023.1 |
| macrolide transporter subunit maca | FE383_RS04430 | Not Available | Positive | 908424 - 909539 | 40626.4 |
| macrolide abc transporter atp-binding protein/permease macb | FE383_RS04435 | Not Available | Positive | 909536 - 911482 | 70706.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





