Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter substrate-binding protein artj | FE383_RS04340 | Not Available | Negative | 889033 - 889764 | 26830.9 |
| arginine abc transporter permease artm | FE383_RS04345 | Not Available | Negative | 890055 - 890723 | 24915.3 |
| arginine abc transporter permease artq | FE383_RS04350 | Not Available | Negative | 890723 - 891439 | 26218.7 |
| arginine abc transporter substrate-binding protein arti | FE383_RS04355 | Not Available | Negative | 891446 - 892177 | 26931.0 |
| arginine abc transporter atp-binding protein artp | FE383_RS04360 | Not Available | Negative | 892195 - 892923 | 27041.7 |
| lipoprotein | FE383_RS04365 | Not Available | Negative | 893141 - 893656 | 18992.4 |
| heavy metal-binding domain-containing protein | FE383_RS04370 | Not Available | Positive | 893782 - 894105 | 11437.7 |
| n-acetylmuramoyl-l-alanine amidase amid | FE383_RS04375 | Not Available | Positive | 894102 - 894932 | 31074.1 |
| nad-dependent epimerase/dehydratase family protein | FE383_RS04380 | Not Available | Negative | 894929 - 895942 | 38087.9 |
| sdr family oxidoreductase | FE383_RS04385 | Not Available | Negative | 896041 - 897471 | 53710.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





