Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphate phosphatase | FE383_RS04245 | Not Available | Negative | 871981 - 872577 | 22399.9 |
| multidrug efflux mfs transporter mdfa | FE383_RS04250 | Not Available | Positive | 872862 - 874094 | 44323.7 |
| protein ybjh | FE383_RS04255 | Not Available | Negative | 874135 - 874419 | 9971.24 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase | FE383_RS04260 | Not Available | Negative | 874505 - 875320 | 30197.9 |
| mfs transporter | FE383_RS04265 | Not Available | Negative | 875320 - 876528 | 41855.1 |
| dna-binding transcriptional regulator rcda | FE383_RS04270 | Not Available | Positive | 876612 - 877148 | 20308.6 |
| aspartate:alanine antiporter | FE383_RS04275 | Not Available | Negative | 877323 - 879008 | 60355.1 |
| inner membrane protein ybjm | FE383_RS04280 | Not Available | Positive | 879278 - 879655 | 14204.0 |
| glutaredoxin 1 | FE383_RS04285 | Not Available | Negative | 879685 - 879942 | 9685.35 |
| duf1418 family protein | FE383_RS04290 | Not Available | Positive | 880102 - 880389 | 10521.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





