Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione abc transporter permease gsic | FE383_RS04195 | Not Available | Positive | 860156 - 861076 | 34068.5 |
| glutathione abc transporter permease gsid | FE383_RS04200 | Not Available | Positive | 861079 - 861990 | 33240.2 |
| eal domain-containing protein | FE383_RS04205 | Not Available | Positive | 862168 - 864516 | 90053.7 |
| ggdef domain-containing protein | FE383_RS04210 | Not Available | Positive | 864524 - 865852 | 49875.8 |
| 30s ribosomal protein s12 methylthiotransferase rimo | FE383_RS04215 | Not Available | Negative | 865899 - 867224 | 49584.6 |
| biofilm formation regulator bssr | FE383_RS04220 | Not Available | Positive | 867437 - 867820 | 14536.6 |
| aldose sugar dehydrogenase ylii | FE383_RS04225 | Not Available | Positive | 867931 - 869046 | 41056.8 |
| glutathione s-transferase gstb | FE383_RS04230 | Not Available | Negative | 869043 - 869669 | 23714.4 |
| serine-type d-ala-d-ala carboxypeptidase | FE383_RS04235 | Not Available | Positive | 869916 - 871118 | 43611.3 |
| dna-binding transcriptional repressor deor | FE383_RS04240 | Not Available | Negative | 871165 - 871923 | 28549.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





