Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate/isopropylmalate family dehydrogenase | FE383_RS05850 | Not Available | Positive | 1200585 - 1200752 | 6177.63 |
| Hypothetical protein | FE383_RS05855 | Not Available | Negative | 1200855 - 1201178 | 12134.1 |
| protein ymgk | FE383_RS22350 | Not Available | Negative | 1201435 - 1201479 | 1589.03 |
| hypothetical protein | FE383_RS05860 | Not Available | Negative | 1201715 - 1201825 | 4303.4 |
| Putative envelope protein | FE383_RS05865 | Not Available | Negative | 1201878 - 1202282 | 15770.0 |
| Attr | Not Available | Not Available | Positive | 1205846 - 1205859 | Not Available |
| Attl | Not Available | Not Available | Positive | 1400886 - 1400897 | Not Available |
| Putative integrase | FE383_RS06895 | Not Available | Negative | 1400917 - 1402152 | 47541.8 |
| Hypothetical protein | FE383_RS06900 | Not Available | Negative | 1402154 - 1402369 | 8456.25 |
| double-strand break reduction protein rcba | FE383_RS06905 | Not Available | Negative | 1402448 - 1402657 | 7863.49 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





