Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EcSS20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232373 bp
Thymine Count
1236884 bp
Guanine Count
1267441 bp
Cytosine Count
1249670 bp
Genome Length
4993062 bp
Protein-coding Genes
4543 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni/fe-hydrogenase b-type cytochrome subunit | ERL57_03860 | Not Available | Positive | 811766 - 812473 | 27584.8 |
| hydrogenase 1 maturation protease | ERL57_03865 | Not Available | Positive | 812470 - 813057 | 21576.7 |
| hydrogenase-1 operon protein hyae | ERL57_03870 | Not Available | Positive | 813054 - 813452 | 14877.6 |
| hydrogenase expression/formation protein | ERL57_03875 | Not Available | Positive | 813449 - 814306 | 31379.4 |
| cytochrome bd-ii oxidase subunit 1 | ERL57_03880 | Not Available | Positive | 814440 - 815984 | 57996.3 |
| cytochrome d ubiquinol oxidase subunit ii | ERL57_03885 | Not Available | Positive | 815996 - 817132 | 42468.4 |
| cytochrome bd-ii oxidase subunit cbdx | ERL57_03890 | Not Available | Positive | 817145 - 817237 | 3597.68 |
| appa family phytase/histidine-type acid phosphatase | ERL57_03895 | Not Available | Positive | 817317 - 818615 | 47203.7 |
| tyrosine-protein kinase | ERL57_03900 | Not Available | Negative | 818736 - 820916 | 81192.5 |
| protein-tyrosine-phosphatase | ERL57_03905 | Not Available | Negative | 820936 - 821382 | 16416.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





