Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EcSS20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232373 bp
Thymine Count
1236884 bp
Guanine Count
1267441 bp
Cytosine Count
1249670 bp
Genome Length
4993062 bp
Protein-coding Genes
4543 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | ERL57_03510 | Not Available | Negative | 728792 - 729418 | 23089.5 |
| mfs transporter | ERL57_03515 | Not Available | Positive | 729733 - 730881 | 41462.2 |
| amino acid permease | ERL57_03520 | Not Available | Positive | 731091 - 732521 | 52458.5 |
| lysr family transcriptional regulator | ERL57_03525 | Not Available | Negative | 732522 - 733430 | 34272.4 |
| nad(p)h oxidoreductase | ERL57_03530 | Not Available | Positive | 733530 - 734120 | 23036.4 |
| pyruvate formate lyase 1-activating protein | ERL57_03535 | Not Available | Negative | 734202 - 734942 | 28205.9 |
| formate c-acetyltransferase | ERL57_03540 | Not Available | Negative | 735134 - 737416 | 85355.0 |
| formate transporter foca | ERL57_03545 | Not Available | Negative | 737471 - 738328 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | ERL57_03550 | Not Available | Negative | 738734 - 740494 | 65680.0 |
| duf421 domain-containing protein | ERL57_03555 | Not Available | Positive | 740624 - 741316 | 26269.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





