Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EcSS20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232373 bp
Thymine Count
1236884 bp
Guanine Count
1267441 bp
Cytosine Count
1249670 bp
Genome Length
4993062 bp
Protein-coding Genes
4543 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein lysm | ERL57_21895 | Not Available | Negative | 4564254 - 4564703 | 16064.0 |
| yqae/pmp3 family membrane protein | ERL57_21900 | Not Available | Negative | 4564787 - 4564945 | 5865.57 |
| transcriptional regulator | ERL57_21905 | Not Available | Positive | 4565128 - 4565427 | 10596.9 |
| thiosulfate sulfurtransferase ygap | ERL57_21910 | Not Available | Positive | 4565437 - 4565961 | 18630.8 |
| dna-binding protein stpa | ERL57_21915 | Not Available | Negative | 4566008 - 4566412 | 15348.4 |
| l-alanine exporter alae | ERL57_21920 | Not Available | Positive | 4567080 - 4567529 | 16902.0 |
| duf2002 family protein | ERL57_21925 | Not Available | Negative | 4567566 - 4567910 | 13066.5 |
| duf883 domain-containing protein | ERL57_21930 | Not Available | Positive | 4568062 - 4568391 | 11847.9 |
| plp-dependent aminotransferase family protein | ERL57_21935 | Not Available | Negative | 4568448 - 4569782 | 49766.2 |
| carboxymuconolactone decarboxylase family protein | ERL57_21940 | Not Available | Positive | 4569870 - 4570301 | 16177.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





