Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EcSS20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232373 bp
Thymine Count
1236884 bp
Guanine Count
1267441 bp
Cytosine Count
1249670 bp
Genome Length
4993062 bp
Protein-coding Genes
4543 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoacetate metabolism transcriptional regulator atoc | ERL57_00930 | Not Available | Negative | 200846 - 202231 | 52165.5 |
| two-component system sensor histidine kinase atos | ERL57_00935 | Not Available | Negative | 202228 - 204054 | 67711.9 |
| two-component system sensor histidine kinase rcsc | ERL57_00940 | Not Available | Positive | 204221 - 207070 | 106645.0 |
| transcriptional regulator rcsb | ERL57_00945 | Not Available | Negative | 207269 - 207919 | 23672.0 |
| phosphotransferase rcsd | ERL57_00950 | Not Available | Negative | 207936 - 210608 | 100350.0 |
| porin ompc | ERL57_00955 | Not Available | Positive | 211347 - 212447 | 40458.4 |
| fad:protein fmn transferase apbe | ERL57_00960 | Not Available | Positive | 212559 - 213614 | 38606.1 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | ERL57_00965 | Not Available | Positive | 213688 - 214752 | 39386.0 |
| dna oxidative demethylase alkb | ERL57_00970 | Not Available | Positive | 214752 - 215402 | 23992.7 |
| microcin j25 efflux abc transporter yoji | ERL57_00975 | Not Available | Positive | 215478 - 217121 | 61626.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





