Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EcSS20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232373 bp
Thymine Count
1236884 bp
Guanine Count
1267441 bp
Cytosine Count
1249670 bp
Genome Length
4993062 bp
Protein-coding Genes
4543 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2594 family protein | ERL57_09420 | Not Available | Positive | 1995094 - 1995318 | 8239.04 |
| transcriptional regulator sdia | ERL57_09425 | Not Available | Negative | 1995385 - 1996107 | 28079.8 |
| l-cystine abc transporter atp-binding protein yecc | ERL57_09430 | Not Available | Negative | 1996337 - 1997089 | 27662.8 |
| amino acid abc transporter permease | ERL57_09435 | Not Available | Negative | 1997086 - 1997754 | 24802.7 |
| d-cysteine desulfhydrase | ERL57_09440 | Not Available | Negative | 1997769 - 1998755 | 35141.4 |
| cystine abc transporter substrate-binding protein | ERL57_09445 | Not Available | Negative | 1998860 - 1999660 | 29026.8 |
| flagella biosynthesis regulatory protein fliz | ERL57_09450 | Not Available | Negative | 1999748 - 2000299 | 21497.9 |
| rna polymerase sigma factor flia | ERL57_09455 | Not Available | Negative | 2000345 - 2001064 | 27522.8 |
| flagellin flic | ERL57_09460 | Not Available | Negative | 2001230 - 2002936 | 57807.1 |
| flagellar filament capping protein flid | ERL57_09465 | Not Available | Positive | 2003202 - 2004608 | 48486.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





