Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EcSS20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232373 bp
Thymine Count
1236884 bp
Guanine Count
1267441 bp
Cytosine Count
1249670 bp
Genome Length
4993062 bp
Protein-coding Genes
4543 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter substrate-binding protein znua | ERL57_09115 | Not Available | Negative | 1940420 - 1941352 | 33918.4 |
| zinc abc transporter atp-binding protein znuc | ERL57_09120 | Not Available | Positive | 1941431 - 1942186 | 27927.3 |
| zinc abc transporter permease subunit znub | ERL57_09125 | Not Available | Positive | 1942183 - 1942968 | 27778.5 |
| holliday junction branch migration dna helicase ruvb | ERL57_09130 | Not Available | Negative | 1943115 - 1944125 | 37174.1 |
| holliday junction branch migration protein ruva | ERL57_09135 | Not Available | Negative | 1944134 - 1944745 | 22087.0 |
| hypothetical protein | ERL57_09140 | Not Available | Negative | 1944913 - 1945497 | 22225.3 |
| hypothetical protein | ERL57_09145 | Not Available | Negative | 1945535 - 1946359 | 31195.9 |
| yebb family permuted papain-like enzyme | ERL57_09150 | Not Available | Positive | 1946453 - 1947055 | 22532.1 |
| crossover junction endodeoxyribonuclease ruvc | ERL57_09155 | Not Available | Negative | 1947057 - 1947578 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | ERL57_09160 | Not Available | Negative | 1947613 - 1948353 | 26408.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





