Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EcSS20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232373 bp
Thymine Count
1236884 bp
Guanine Count
1267441 bp
Cytosine Count
1249670 bp
Genome Length
4993062 bp
Protein-coding Genes
4543 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | ERL57_07290 | Not Available | Negative | 1540449 - 1541432 | 36803.9 |
| phenylalanyl--trna ligase operon leader peptide | ERL57_07295 | Not Available | Negative | 1541716 - 1541760 | 1762.13 |
| 50s ribosomal protein l20 | ERL57_07300 | Not Available | Negative | 1541883 - 1542239 | 13497.7 |
| 50s ribosomal protein l35 | ERL57_07305 | Not Available | Negative | 1542293 - 1542490 | 7289.38 |
| translation initiation factor if-3 | ERL57_07310 | Not Available | Negative | 1542587 - 1543129 | 20565.2 |
| threonine--trna ligase | ERL57_07315 | Not Available | Negative | 1543133 - 1545061 | 74018.4 |
| shet2/espl2 family type iii secretion system effector toxin | ERL57_07320 | Not Available | Positive | 1545582 - 1547480 | 70717.1 |
| hypothetical protein | ERL57_07325 | Not Available | Positive | 1547643 - 1547750 | 4115.44 |
| duf481 domain-containing protein | ERL57_07330 | Not Available | Negative | 1547803 - 1548561 | 27608.6 |
| 6-phosphofructokinase ii | ERL57_07335 | Not Available | Positive | 1548848 - 1549777 | 32416.8 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





