Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EcSS20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232373 bp
Thymine Count
1236884 bp
Guanine Count
1267441 bp
Cytosine Count
1249670 bp
Genome Length
4993062 bp
Protein-coding Genes
4543 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine phosphoribosyltransferase | ERL57_05650 | Not Available | Positive | 1188879 - 1189415 | 20102.4 |
| carbonate dehydratase | ERL57_05655 | Not Available | Negative | 1189456 - 1190118 | 25098.2 |
| abc transporter atp-binding protein | ERL57_05660 | Not Available | Positive | 1190227 - 1191153 | 34649.2 |
| abc transporter permease | ERL57_05665 | Not Available | Positive | 1191150 - 1191920 | 28517.9 |
| pts sugar transporter subunit iia | ERL57_05670 | Not Available | Positive | 1192025 - 1192465 | 16492.9 |
| polysaccharide deacetylase family protein | ERL57_05675 | Not Available | Positive | 1192529 - 1193758 | 46419.0 |
| aspartate 1-decarboxylase | ERL57_05680 | Not Available | Negative | 1193762 - 1194142 | 13834.5 |
| rpn family recombination-promoting nuclease/putative transposase | ERL57_05685 | Not Available | Positive | 1194416 - 1195324 | 34842.1 |
| pantoate--beta-alanine ligase | ERL57_05690 | Not Available | Negative | 1195545 - 1196396 | 31578.5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | ERL57_05695 | Not Available | Negative | 1196408 - 1197202 | 28132.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





