Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EcSS20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1232373 bp
Thymine Count
1236884 bp
Guanine Count
1267441 bp
Cytosine Count
1249670 bp
Genome Length
4993062 bp
Protein-coding Genes
4543 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | ERL57_05295 | Not Available | Negative | 1101514 - 1102503 | 35208.0 |
| peptidylprolyl isomerase sura | ERL57_05300 | Not Available | Negative | 1102503 - 1103789 | 47314.6 |
| lps assembly protein lptd | ERL57_05305 | Not Available | Negative | 1103842 - 1106196 | 89675.8 |
| co-chaperone djla | ERL57_05310 | Not Available | Positive | 1106451 - 1107266 | 30567.2 |
| udp pyrophosphate phosphatase | ERL57_05315 | Not Available | Positive | 1107561 - 1108307 | 28156.1 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | ERL57_05325 | Not Available | Negative | 1108713 - 1109372 | 24862.1 |
| rna polymerase-associated protein rapa | ERL57_05330 | Not Available | Negative | 1109384 - 1112290 | 109802.0 |
| dna polymerase ii | ERL57_05335 | Not Available | Negative | 1112454 - 1114805 | 90034.6 |
| l-ribulose-5-phosphate 4-epimerase | ERL57_05340 | Not Available | Negative | 1114880 - 1115575 | 25534.4 |
| l-arabinose isomerase | ERL57_05345 | Not Available | Negative | 1115690 - 1117192 | 56092.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





