Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EC17GD31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain EC17GD31 chromosome, complete genome.
Gene Summary
Adenine Count
1232855 bp
Thymine Count
1232397 bp
Guanine Count
1257098 bp
Cytosine Count
1253482 bp
Genome Length
4975832 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide response transcriptional regulator soxs | DWB25_RS21900 | Not Available | Positive | 4513201 - 4513524 | 12911.6 |
| c-di-gmp phosphodiesterase pdec | DWB25_RS21905 | Not Available | Negative | 4513527 - 4515113 | 60634.4 |
| yjcb family protein | DWB25_RS21910 | Not Available | Positive | 4515543 - 4515824 | 10304.0 |
| single-stranded dna-binding protein ssb1 | DWB25_RS21915 | Not Available | Negative | 4515923 - 4516459 | 18976.1 |
| excinuclease abc subunit uvra | DWB25_RS21920 | Not Available | Positive | 4516714 - 4519536 | 103874.0 |
| mmcq/yjbr family dna-binding protein | DWB25_RS21925 | Not Available | Negative | 4519571 - 4519927 | 13520.2 |
| secondary thiamine-phosphate synthase enzyme yjbq | DWB25_RS21930 | Not Available | Negative | 4519931 - 4520347 | 15656.8 |
| acid phosphatase apha | DWB25_RS21935 | Not Available | Negative | 4520458 - 4521171 | 26104.9 |
| type iii effector protein | DWB25_RS28460 | Not Available | Positive | 4521572 - 4521794 | 8480.0 |
| aromatic amino acid transaminase | DWB25_RS21945 | Not Available | Negative | 4522298 - 4523491 | 43609.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





